ASME B1.1 calls for the nominal sizes starting at ¼" and up as ¼, 5/16, 3/8, 7/16, ½........
Same holds true for the machinery handbook & Federal Standard H28A
I don't know the way you're leaning, but it appears Pro/E is notating them correctly. If you're leaning toward the standard, tell your boss to stick to managing and let you do what you do best. I've never heard anyone suggest that threads should be a .250-20 designation.
Regards,
Jeff Horacek
Sr. Designer
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STERIS Corporation
5960 Heisley Rd.
Mentor, OH 44060
(440)392-7721 P
(440)392-8954 F