This message is not so much for Scott, but for the benefit of
others reading this thread having the same question ....
The "start" and "stop" methods in your J-Link application are
called by Pro/Engineer when it wants to start and/or stop your
program. You shouldn't need to call it yourself.
Not only will calling your "stop" method not stop your app, but
it could also hose up Pro/Engineer in the process.